STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
actn4Alpha-actinin-4 isoform X1. (929 aa)    
Predicted Functional Partners:
LOC106611807
Vinculin isoform X1.
   
 0.962
VCL
Vinculin-like isoform X2.
   
 0.962
LOC106604178
Vinculin-like isoform X2.
   
 0.962
zyx
Zyxin isoform X1.
   
 0.930
LOC106576313
Zyxin-like.
   
 0.930
ENSSSAP00000007649
Catenin alpha-2-like.
   
 0.929
Ctnna2
Catenin alpha 2.
   
 0.929
CTNNA1
Catenin alpha-1.
   
 0.929
LOC106567236
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3-like isoform X4.
   
 0.921
LOC106571865
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1-like isoform X1.
    
 0.916
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.