STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106592279Otogelin-like. (1876 aa)    
Predicted Functional Partners:
LOC106571274
Unconventional myosin-VI-like isoform X3; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.754
ENSSSAP00000112373
Myosin VIa.
    
 
 0.754
LOC106569022
Otolin-1.
   
  
 0.731
otol1
Otolin-1.
   
  
 0.731
dh12b
Estradiol 17-beta-dehydrogenase 12-B; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.723
gle1
Nucleoporin GLE1.
    
 0.708
Fau
Small subunit ribosomal protein S30e.
   
  0.685
rs30
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.685
ENSSSAP00000052427
annotation not available
   
  0.685
ENSSSAP00000060568
annotation not available
   
  0.685
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.