STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106569487Carbonic anhydrase 4-like isoform X2; Belongs to the alpha-carbonic anhydrase family. (324 aa)    
Predicted Functional Partners:
RPF2
Ribosome production factor 2 homolog.
   
 
 0.647
LOC106571313
Ribosome production factor 2 homolog isoform X1.
   
 
 0.647
LOC106579528
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
 
 0.618
LOC106613684
UV excision repair protein RAD23 homolog B-like.
   
  
 0.562
LOC106601193-2
UV excision repair protein RAD23 homolog A-like isoform X1.
   
  
 0.562
LOC106573817
UV excision repair protein RAD23 homolog B-like isoform X1.
   
  
 0.562
MOK
MAPK/MAK/MRK overlapping kinase-like isoform X2.
      
 0.554
mak
Serine/threonine-protein kinase MAK isoform X1.
      
 0.554
LOC100500787
Myocyte-specific enhancer factor 2C isoform X4.
      
 0.550
nle1
Notchless protein homolog 1 isoform X1.
   
  
 0.535
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.