STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000065814annotation not available (312 aa)    
Predicted Functional Partners:
fastkd2
FAST kinase domain-containing protein 2.
   
 
 0.672
mrpl19
39S ribosomal protein L19, mitochondrial.
   
 
 0.663
pink1
Serine/threonine-protein kinase PINK1, mitochondrial.
     
 0.657
LOC106588703
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
    
 
 0.642
LOC106570330
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
    
 
 0.642
RL23A
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
    
   0.634
ENSSSAP00000075673
annotation not available
    
   0.634
mrpl20
39S ribosomal protein L20, mitochondrial; Belongs to the bacterial ribosomal protein bL20 family.
    
 
 0.592
LOC106583065
39S ribosomal protein L20, mitochondrial-like.
    
 
 0.592
mrpl9
39S ribosomal protein L9, mitochondrial isoform X1.
    
   0.590
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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