ENSSSAP00000067056 protein (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSSSAP00000067056

annotation not available (124 aa)

Predicted Functional Partners:

ENSSSAP00000087899

0.528

ENSSSAP00000050603

0.497

ENSSSAP00000026282

0.428

ENSSSAP00000043614

0.404

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSSSAP00000026282	ENSSSAP00000067056	annotation not available	annotation not available	0.428
ENSSSAP00000043614	ENSSSAP00000067056	annotation not available	annotation not available	0.404
ENSSSAP00000050603	ENSSSAP00000067056	annotation not available	annotation not available	0.497
ENSSSAP00000067056	ENSSSAP00000026282	annotation not available	annotation not available	0.428
ENSSSAP00000067056	ENSSSAP00000043614	annotation not available	annotation not available	0.404
ENSSSAP00000067056	ENSSSAP00000050603	annotation not available	annotation not available	0.497
ENSSSAP00000067056	ENSSSAP00000087899	annotation not available	annotation not available	0.528
ENSSSAP00000087899	ENSSSAP00000067056	annotation not available	annotation not available	0.528