STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000070286annotation not available (41 aa)    
Predicted Functional Partners:
sympk
Symplekin.
    
 
 0.724
trrap
Transformation/transcription domain-associated protein isoform X8; Belongs to the PI3/PI4-kinase family.
   
 
 0.712
LOC106565976
WD repeat-containing protein 82.
    
 
 0.664
LOC106582800
WD repeat-containing protein 82-like isoform X1.
    
 
 0.664
WDR82
WD repeat-containing protein 82-like.
    
 
 0.664
LOC106561686
Nuclear receptor subfamily 2 group C member 1-A-like isoform X1.
    
 
 0.568
NR2C1
Nuclear receptor subfamily 2 group C member 1-A-like isoform X6.
    
 
 0.568
nr2c2
Nuclear receptor subfamily 2 group C member 2 isoform X1.
    
 
 0.568
LOC106565645
Uncharacterized protein LOC106565645.
    
 
 0.559
ssu72l
Ssu72 RNA polymerase II CTD phosphatase-like.
    
 
 0.559
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.