STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000072199annotation not available (268 aa)    
Predicted Functional Partners:
brca1
Breast cancer type 1 susceptibility protein isoform X2.
   
 
 0.738
TLR-2
Toll-like receptor 13.
    
 0.537
TLR8
TLR8-like precursor; Belongs to the Toll-like receptor family.
    
 0.528
LOC106586812
Toll-like receptor 7; Belongs to the Toll-like receptor family.
    
 0.528
tmsb4x
Toll-like receptor 8a2; Belongs to the Toll-like receptor family.
    
 0.528
ENSSSAP00000007919
annotation not available
   
 
 0.525
cnpy3
Canopy homolog 3 isoform X1.
   
 
 0.525
cnpy4
Protein canopy 4 precursor.
   
 
 0.525
ENSSSAP00000005579
annotation not available
    
 0.517
LOC106606329
Toll-like receptor 13.
    
 0.517
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.