STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106572515Cysteine/serine-rich nuclear protein 2-like. (567 aa)    
Predicted Functional Partners:
gpr84
G-protein coupled receptor 84.
      
 0.588
LOC106572590
Zinc finger and BTB domain-containing protein 39-like.
   
  
 0.580
LOC106567078
Zinc finger and BTB domain-containing protein 39-like.
   
  
 0.580
LOC106576436
Lamin tail domain-containing protein 1-like isoform X1.
      
 0.511
LOC106601579
Serine/threonine-protein phosphatase alpha-2 isoform-like.
    
   0.489
pp1g
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
   0.489
LOC106601579-2
Serine/threonine-protein phosphatase alpha-2 isoform-like.
    
   0.489
ppp1cc
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
   0.489
ppp1cc-2
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
   0.489
ccdc65
Coiled-coil domain-containing protein 65.
      
 0.436
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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