Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HMG20B | LOC106560766 | ENSSSAP00000024201 | ENSSSAP00000073004 | annotation not available | PHD finger protein 21A-like isoform X1. | 0.923 |
HMG20B | LOC106562352 | ENSSSAP00000024201 | ENSSSAP00000018063 | annotation not available | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | 0.974 |
HMG20B | LOC106564802 | ENSSSAP00000024201 | ENSSSAP00000082916 | annotation not available | REST corepressor 3-like isoform X2. | 0.872 |
HMG20B | LOC106585063 | ENSSSAP00000024201 | ENSSSAP00000005537 | annotation not available | REST corepressor 3-like isoform X1. | 0.872 |
HMG20B | LOC106590004 | ENSSSAP00000024201 | ENSSSAP00000021217 | annotation not available | AT-rich interactive domain-containing protein 4B-like. | 0.559 |
HMG20B | LOC106610674 | ENSSSAP00000024201 | ENSSSAP00000005587 | annotation not available | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | 0.974 |
HMG20B | hmg20a | ENSSSAP00000024201 | ENSSSAP00000077850 | annotation not available | High mobility group protein 20A isoform X1. | 0.935 |
HMG20B | rcor1 | ENSSSAP00000024201 | ENSSSAP00000068748 | annotation not available | REST corepressor 1 isoform X2. | 0.872 |
HMG20B | rcor2 | ENSSSAP00000024201 | ENSSSAP00000038152 | annotation not available | REST corepressor 2. | 0.872 |
LOC106560766 | HMG20B | ENSSSAP00000073004 | ENSSSAP00000024201 | PHD finger protein 21A-like isoform X1. | annotation not available | 0.923 |
LOC106560766 | LOC106562352 | ENSSSAP00000073004 | ENSSSAP00000018063 | PHD finger protein 21A-like isoform X1. | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | 0.926 |
LOC106560766 | LOC106564802 | ENSSSAP00000073004 | ENSSSAP00000082916 | PHD finger protein 21A-like isoform X1. | REST corepressor 3-like isoform X2. | 0.808 |
LOC106560766 | LOC106585063 | ENSSSAP00000073004 | ENSSSAP00000005537 | PHD finger protein 21A-like isoform X1. | REST corepressor 3-like isoform X1. | 0.808 |
LOC106560766 | LOC106590004 | ENSSSAP00000073004 | ENSSSAP00000021217 | PHD finger protein 21A-like isoform X1. | AT-rich interactive domain-containing protein 4B-like. | 0.789 |
LOC106560766 | LOC106610674 | ENSSSAP00000073004 | ENSSSAP00000005587 | PHD finger protein 21A-like isoform X1. | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | 0.926 |
LOC106560766 | LOC106613768 | ENSSSAP00000073004 | ENSSSAP00000006012 | PHD finger protein 21A-like isoform X1. | annotation not available | 0.923 |
LOC106560766 | hmg20a | ENSSSAP00000073004 | ENSSSAP00000077850 | PHD finger protein 21A-like isoform X1. | High mobility group protein 20A isoform X1. | 0.803 |
LOC106560766 | rcor1 | ENSSSAP00000073004 | ENSSSAP00000068748 | PHD finger protein 21A-like isoform X1. | REST corepressor 1 isoform X2. | 0.808 |
LOC106560766 | rcor2 | ENSSSAP00000073004 | ENSSSAP00000038152 | PHD finger protein 21A-like isoform X1. | REST corepressor 2. | 0.808 |
LOC106562352 | HMG20B | ENSSSAP00000018063 | ENSSSAP00000024201 | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | annotation not available | 0.974 |
page 1 of 5