STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000074556annotation not available (163 aa)    
Predicted Functional Partners:
ap5m1
AP-5 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
      
 0.595
TMEM38B
Trimeric intracellular cation channel type B-like.
      
 0.586
TMEM38B-2
Trimeric intracellular cation channel type B-like isoform X2.
      
 0.586
nol9
Polynucleotide 5'-hydroxyl-kinase NOL9 isoform X1.
      
 0.573
riok2
Serine/threonine-protein kinase RIO2.
      
 0.564
K0415
K0415 protein.
      
 0.558
golm1
Golgi membrane protein 1 isoform X1.
      
 0.465
spg11
Spatacsin isoform X2.
      
 0.437
golga5
Golgin subfamily A member 5.
     
 0.430
gosr1
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
     
 0.424
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.