STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106569290Pancreas transcription factor 1 subunit alpha. (269 aa)    
Predicted Functional Partners:
lhx1
LIM/homeobox protein Lhx1 isoform X1.
    
 0.713
LOC106565033
Recombining binding protein suppressor of hairless-like protein isoform X4.
   
 0.685
PAX2
Paired box 2.
      
 0.653
bhlhe22
Class E basic helix-loop-helix protein 22.
   
 
 0.611
BHLHE22
Class E basic helix-loop-helix protein 22-like.
   
 
 0.611
rbpj
Recombining binding protein suppressor of hairless.
   
 0.585
ENSSSAP00000008726
annotation not available
   
 0.585
ENSSSAP00000028387
Recombining binding protein suppressor of hairless-like.
   
 0.585
LOC106577485
Recombining binding protein suppressor of hairless isoform X2.
   
 0.585
LOC106581182
Hepatocyte nuclear factor 1-beta-A-like isoform X1.
     
 0.576
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.