STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106591474-528S ribosomal protein S33, mitochondrial-like. (106 aa)    
Predicted Functional Partners:
mrps31
28S ribosomal protein S31, mitochondrial.
   
 0.951
mrps18b
28S ribosomal protein S18b, mitochondrial.
   
 0.912
mrps18c
28S ribosomal protein S18c, mitochondrial isoform X1.
   
 0.908
ENSSSAP00000094764
annotation not available
   
 0.908
mrps10
28S ribosomal protein S10, mitochondrial.
   
 0.899
mrps27
28S ribosomal protein S27, mitochondrial.
    
  0.895
mrps21
28S ribosomal protein S21, mitochondrial.
   
 0.894
ENSSSAP00000047825
Mitochondrial ribosomal protein S21.
   
 0.894
mrps11
28S ribosomal protein S11, mitochondrial isoform X1; Belongs to the universal ribosomal protein uS11 family.
   
 0.890
mrps25
28S ribosomal protein S25, mitochondrial.
   
 0.889
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.