STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptprn2Receptor-type tyrosine-protein phosphatase N2 isoform X1. (1084 aa)    
Predicted Functional Partners:
CDH8
Cadherin-8-like.
   
 0.647
CDH8-2
Cadherin-8-like isoform X1; Cadherins are calcium-dependent cell adhesion proteins.
   
 0.647
GABRB2
Gamma-aminobutyric acid receptor subunit beta-2 isoform X1; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
  
 0.639
GABRB2-2
Gamma-aminobutyric acid receptor subunit beta-2-like.
   
  
 0.639
CDH4
Cadherin-4 isoform X2; Cadherins are calcium-dependent cell adhesion proteins.
    
 0.631
LOC106603321
Teneurin-1-like isoform X2.
   
  
 0.604
LOC106567800
Teneurin-1-like isoform X2.
   
  
 0.604
tenm2
Teneurin-2 isoform X1.
   
  
 0.598
LOC106567504
Gamma-aminobutyric acid receptor subunit gamma-2.
   
  
 0.596
LOC106603848
Gamma-aminobutyric acid receptor subunit gamma-2 isoform X2; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
  
 0.596
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.