STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106580882RING-box protein 2. (113 aa)    
Predicted Functional Partners:
SKP1-2
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.979
SKP1
S-phase kinase associated protein 1.
   
 0.977
CUL2
Cullin-2 isoform X1; Belongs to the cullin family.
    
 0.970
LOC106603716
Cullin-5-like isoform X3; Belongs to the cullin family.
    
 0.961
cul5
Cullin-5; Belongs to the cullin family.
    
 0.961
LOC106567583
Cullin-5-like isoform X5; Belongs to the cullin family.
    
 0.961
ENSSSAP00000121132
annotation not available
    
 0.961
cul2
Cullin 2.
    
 0.959
LOC106599567
UBX domain-containing protein 7-like isoform X1.
    
 0.945
LOC106568865
UBX domain-containing protein 7-like.
    
 0.945
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.