Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSSSAP00000076273 | ENSSSAP00000116555 | ENSSSAP00000076273 | ENSSSAP00000116555 | annotation not available | annotation not available | 0.997 |
ENSSSAP00000076273 | LOC106571487 | ENSSSAP00000076273 | ENSSSAP00000057125 | annotation not available | cyclin-C-like; Belongs to the cyclin family. | 0.982 |
ENSSSAP00000076273 | LOC106581951 | ENSSSAP00000076273 | ENSSSAP00000117067 | annotation not available | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.987 |
ENSSSAP00000076273 | LOC106589137 | ENSSSAP00000076273 | ENSSSAP00000077747 | annotation not available | Protein CBFA2T1-like. | 0.705 |
ENSSSAP00000076273 | MED14 | ENSSSAP00000076273 | ENSSSAP00000094442 | annotation not available | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.987 |
ENSSSAP00000076273 | med23 | ENSSSAP00000076273 | ENSSSAP00000117754 | annotation not available | Mediator of RNA polymerase II transcription subunit 23 isoform X4. | 0.994 |
ENSSSAP00000076273 | med29 | ENSSSAP00000076273 | ENSSSAP00000068524 | annotation not available | Mediator of RNA polymerase II transcription subunit 29. | 0.993 |
ENSSSAP00000076273 | med6 | ENSSSAP00000076273 | ENSSSAP00000000132 | annotation not available | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.997 |
ENSSSAP00000116555 | ENSSSAP00000076273 | ENSSSAP00000116555 | ENSSSAP00000076273 | annotation not available | annotation not available | 0.997 |
ENSSSAP00000116555 | LOC106571487 | ENSSSAP00000116555 | ENSSSAP00000057125 | annotation not available | cyclin-C-like; Belongs to the cyclin family. | 0.993 |
ENSSSAP00000116555 | LOC106581951 | ENSSSAP00000116555 | ENSSSAP00000117067 | annotation not available | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.997 |
ENSSSAP00000116555 | LOC106589137 | ENSSSAP00000116555 | ENSSSAP00000077747 | annotation not available | Protein CBFA2T1-like. | 0.736 |
ENSSSAP00000116555 | MED14 | ENSSSAP00000116555 | ENSSSAP00000094442 | annotation not available | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.997 |
ENSSSAP00000116555 | med17 | ENSSSAP00000116555 | ENSSSAP00000028179 | annotation not available | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.997 |
ENSSSAP00000116555 | med23 | ENSSSAP00000116555 | ENSSSAP00000117754 | annotation not available | Mediator of RNA polymerase II transcription subunit 23 isoform X4. | 0.999 |
ENSSSAP00000116555 | med29 | ENSSSAP00000116555 | ENSSSAP00000068524 | annotation not available | Mediator of RNA polymerase II transcription subunit 29. | 0.998 |
ENSSSAP00000116555 | med6 | ENSSSAP00000116555 | ENSSSAP00000000132 | annotation not available | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.999 |
LOC106571487 | ENSSSAP00000076273 | ENSSSAP00000057125 | ENSSSAP00000076273 | cyclin-C-like; Belongs to the cyclin family. | annotation not available | 0.982 |
LOC106571487 | ENSSSAP00000116555 | ENSSSAP00000057125 | ENSSSAP00000116555 | cyclin-C-like; Belongs to the cyclin family. | annotation not available | 0.993 |
LOC106571487 | LOC106581951 | ENSSSAP00000057125 | ENSSSAP00000117067 | cyclin-C-like; Belongs to the cyclin family. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.993 |
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