STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106572659Beta-1,4 N-acetylgalactosaminyltransferase 1-like. (486 aa)    
Predicted Functional Partners:
st8sia1
alpha-N-acetylneuraminide alpha-2,8-sialyltransferase; Belongs to the glycosyltransferase 29 family.
     
 0.939
LOC106568911
Beta-hexosaminidase.
     
 0.925
LOC106581457
Acetyl-coenzyme A transporter 1-like isoform X1.
     
 0.911
LOC106613271
Acetyl-coenzyme A transporter 1-like.
     
 0.911
HEXA
Beta-hexosaminidase.
     
 0.909
st8sia5
Alpha-2,8-sialyltransferase 8E isoform X1; Belongs to the glycosyltransferase 29 family.
     
 0.903
LOC106588277
Alpha-2,8-sialyltransferase 8F-like isoform X1; Belongs to the glycosyltransferase 29 family.
     
 0.903
LOC106576759
Alpha-2,8-sialyltransferase 8E-like; Belongs to the glycosyltransferase 29 family.
     
 0.903
LOC106589773
Lactosylceramide alpha-2,3-sialyltransferase-like; Belongs to the glycosyltransferase 29 family.
     
 0.903
b4gn1
Beta-1,4 N-acetylgalactosaminyltransferase.
  
  
 
0.902
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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