STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
catsperbCation channel sperm-associated protein subunit beta isoform X1. (1150 aa)    
Predicted Functional Partners:
catsperd
Cation channel sperm-associated protein subunit delta isoform X1.
  
 
 0.998
LOC106563455
Cation channel sperm-associated protein 1-like isoform X1.
    
 0.995
pcbd2
Cation channel sperm-associated protein 3 isoform X1.
    
 0.995
LOC106603651
Cation channel sperm-associated protein subunit gamma-like.
  
 
 0.993
CATSPER2
Cation channel sperm-associated protein 2 isoform X2.
  
 
 0.992
catsper4
Cation channel sperm-associated protein 4.
  
 
 0.941
catspere
Uncharacterized protein C1orf101 homolog isoform X1.
  
 
 0.937
efcab9
EF-hand calcium-binding domain-containing protein 9 isoform X1.
  
 
 
 0.881
ENSSSAP00000034674
annotation not available
  
 
 
 0.880
LOC106578905
Voltage-dependent T-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. This channel gives rise to T-type calcium currents. T-type calcium channels belong to the "low-voltage activated (LVA)" group and are strongly blocked by nickel and mibefradil. A particularity of this type of channels is an opening at quite ne [...]
    
 0.864
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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