STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106613045Forkhead box protein G1-like. (426 aa)    
Predicted Functional Partners:
foxg1
Forkhead box protein G1.
  
  
 
0.905
LOC106611199
Forkhead box protein G1-like.
  
  
 
0.904
LOC106572920
methyl-CpG-binding protein 2-like isoform X1.
    
 0.595
LOC106566345
methyl-CpG-binding protein 2-like.
    
 0.595
LOC106604510
NAD-dependent protein deacetylase sirtuin-1-like isoform X2.
    
 0.586
sirt1
NAD-dependent protein deacetylase sirtuin-1.
    
 0.586
ATG7
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 as well as the ATG8 family proteins for their conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Required for autophagic death induced by caspase-8 inhibition. Required for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria [...]
   
 0.586
SIRT2
NAD-dependent protein deacetylase; NAD-dependent protein deacetylase.
    
 0.569
ctnnb1
Catenin beta-1.
    
 0.554
LOC106607967
Forkhead box protein O3-like.
    
0.474
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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