STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fkbp15Peptidylprolyl isomerase. (932 aa)    
Predicted Functional Partners:
gosr1
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.819
stx5
Syntaxin-5 isoform X1; Belongs to the syntaxin family.
   
 0.734
LOC106604387
Syntaxin-5-like; Belongs to the syntaxin family.
   
 0.734
STX5
Syntaxin-5-like; Belongs to the syntaxin family.
   
 0.734
ENSSSAP00000087136
annotation not available
   
 0.734
ENSSSAP00000087141
annotation not available
   
 0.734
ENSSSAP00000000690
General vesicular transport factor p115-like.
   
 0.656
uso1
General vesicular transport factor p115.
   
 0.656
ENSSSAP00000032760
annotation not available
   
 0.656
LOC106569506
Golgi reassembly-stacking protein 2-like isoform X2.
    
 0.628
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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