STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106576775Cysteine sulfinic acid decarboxylase-like isoform X1. (530 aa)    
Predicted Functional Partners:
CDO1
Cysteine dioxygenase.
     
 0.967
cdo1
Cysteine dioxygenase.
     
 0.967
aedo
2-aminoethanethiol dioxygenase.
     
 0.962
LOC106613884
2-aminoethanethiol dioxygenase-like.
     
 0.904
LOC106607859
2-aminoethanethiol dioxygenase-like.
     
 0.904
LOC106591225
2-aminoethanethiol dioxygenase-like.
     
 0.904
gadl1
Glutamate decarboxylase-like protein 1.
  
  
 
0.901
LOC106605019
Cysteine sulfinic acid decarboxylase-like.
  
  
 
0.900
LOC106587404
Aspartate aminotransferase.
   
 
 0.824
LOC106573756
Aspartate aminotransferase.
   
 
 0.824
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.