STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106584073Protein FAM26F-like isoform X1. (326 aa)    
Predicted Functional Partners:
rubcnl
Uncharacterized protein KIAA0226-like homolog.
   
    0.641
ca109
C1orf109 homolog.
   
    0.609
ENSSSAP00000111147
annotation not available
   
    0.609
fbxo47
F-box only protein 47.
   
    0.600
LOC100196869
PHD finger protein 20-like protein 1 isoform X6.
      
 0.511
LOC106595961
PHD finger protein 20-like protein 1.
      
 0.511
LOC106566875
Uncharacterized protein LOC106566875 isoform X3.
      
 0.511
lman2l
VIP36-like protein isoform X1.
      
 0.511
ENSSSAP00000026044
Molybdenum cofactor synthesis 3.
   
    0.485
ccd49
Coiled-coil domain-containing protein 49.
   
    0.485
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.