STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106590648Tartrate-resistant acid phosphatase type 5. (323 aa)    
Predicted Functional Partners:
acp1
Low molecular weight phosphotyrosine protein phosphatase isoform X1.
    
 0.948
RFK
Riboflavin kinase-like.
  
 
 0.924
rfk
Riboflavin kinase.
  
 
 0.924
LOC106561944
Lysosomal acid phosphatase-like isoform X1; Belongs to the histidine acid phosphatase family.
   
 
 0.919
BLVRB
Flavin reductase (NADPH)-like.
    
 0.917
blvrb
Flavin reductase (NADPH).
    
 0.917
LOC100380852
Ectonucleotide pyrophosphatase/phosphodiesterase family member 1.
   
 0.905
LOC106571209
Ectonucleotide pyrophosphatase/phosphodiesterase family member 3-like.
   
 0.905
LOC106588363
Venom phosphodiesterase 1-like.
   
 0.905
LOC106589400
Tartrate-resistant acid phosphatase type 5.
  
  
 
0.903
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.