STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmem45aTransmembrane protein 45A. (129 aa)    
Predicted Functional Partners:
epo
Erythropoietin; Erythropoietin is the principal hormone involved in the regulation of erythrocyte differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Belongs to the EPO/TPO family.
  
   
 0.524
LOC106577763
Erythropoietin; Erythropoietin is the principal hormone involved in the regulation of erythrocyte differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Belongs to the EPO/TPO family.
  
   
 0.520
LOC106564539
Serine hydrolase-like protein.
      
 0.481
ENSSSAP00000012456
annotation not available
      
 0.481
LOC106581397
Tumor necrosis factor receptor superfamily member 19L-like.
  
     0.462
LOC106603206
Erythropoietin-like isoform X2.
  
   
 0.460
LOC106613202
Tumor necrosis factor receptor superfamily member 19L-like.
  
     0.453
LOC106573585
Transmembrane protein 221-like.
      
 0.438
LOC106613727
Transmembrane protein 221-like isoform X1.
      
 0.438
ehf
ETS homologous factor isoform X1.
   
  
 0.437
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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