STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC10658514839S ribosomal protein L41, mitochondrial-like. (135 aa)    
Predicted Functional Partners:
ENSSSAP00000051367
annotation not available
   
 
 0.996
mrps11
28S ribosomal protein S11, mitochondrial isoform X1; Belongs to the universal ribosomal protein uS11 family.
   
 
 0.992
mrpl19
39S ribosomal protein L19, mitochondrial.
   
 
 0.991
mrpl40
39S ribosomal protein L40, mitochondrial isoform X1.
   
 
 0.990
mrpl43
39S ribosomal protein L43, mitochondrial.
   
 
 0.990
mrpl16
39S ribosomal protein L16, mitochondrial isoform X2; Belongs to the universal ribosomal protein uL16 family.
   
 0.989
mrpl34
LOW QUALITY PROTEIN: 39S ribosomal protein L34, mitochondrial.
   
 
 0.988
mrpl3
39S ribosomal protein L3, mitochondrial; Belongs to the universal ribosomal protein uL3 family.
   
  0.987
mrpl46
39S ribosomal protein L46, mitochondrial.
   
 
 0.986
mrps6
28S ribosomal protein S6, mitochondrial.
   
 0.985
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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