STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106567968peptidyl-tRNA hydrolase 2, mitochondrial-like. (193 aa)    
Predicted Functional Partners:
usp30
Ubiquitin carboxyl-terminal hydrolase.
    
  0.695
tomm70a
Mitochondrial import receptor subunit TOM70.
     
 0.661
LOC106603817
Voltage-dependent anion-selective channel protein 1.
   
 
  0.648
LOC106604847
Insulin-degrading enzyme-like isoform X2; Belongs to the peptidase M16 family.
     
 0.521
LOC106576795
Insulin-degrading enzyme isoform X2; Belongs to the peptidase M16 family.
     
 0.521
tomm20
Mitochondrial import receptor subunit TOM20 homolog.
   
 
 0.518
LOC106564829
Mitochondrial import receptor subunit TOM20 homolog.
   
 
 0.518
LOC106586159
Mitochondrial import receptor subunit TOM20 homolog.
   
 
 0.518
lonp1
Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family.
      
 0.511
tti2
TELO2-interacting protein 2 isoform X1.
      
 0.511
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.