Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HRAS | LOC106561562 | ENSSSAP00000105650 | ENSSSAP00000008722 | GTPase HRas-like. | Kit ligand-like. | 0.480 |
HRAS | kit | ENSSSAP00000105650 | ENSSSAP00000087611 | GTPase HRas-like. | Mast/stem cell growth factor receptor Kit isoform X2; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | 0.937 |
HRAS | kitlg | ENSSSAP00000105650 | ENSSSAP00000037364 | GTPase HRas-like. | Kit ligand. | 0.480 |
HRAS | rash | ENSSSAP00000105650 | ENSSSAP00000103505 | GTPase HRas-like. | GTPase HRas isoform X1. | 0.900 |
LOC106561562 | HRAS | ENSSSAP00000008722 | ENSSSAP00000105650 | Kit ligand-like. | GTPase HRas-like. | 0.480 |
LOC106561562 | LOC106565101 | ENSSSAP00000008722 | ENSSSAP00000120009 | Kit ligand-like. | Uncharacterized protein LOC106565101. | 0.441 |
LOC106561562 | LOC106601908 | ENSSSAP00000008722 | ENSSSAP00000032578 | Kit ligand-like. | GTPase HRas-like isoform X1. | 0.480 |
LOC106561562 | csf1 | ENSSSAP00000008722 | ENSSSAP00000119084 | Kit ligand-like. | Macrophage colony-stimulating factor 1. | 0.458 |
LOC106561562 | kit | ENSSSAP00000008722 | ENSSSAP00000087611 | Kit ligand-like. | Mast/stem cell growth factor receptor Kit isoform X2; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | 0.988 |
LOC106561562 | kitlg | ENSSSAP00000008722 | ENSSSAP00000037364 | Kit ligand-like. | Kit ligand. | 0.902 |
LOC106561562 | rash | ENSSSAP00000008722 | ENSSSAP00000103505 | Kit ligand-like. | GTPase HRas isoform X1. | 0.480 |
LOC106561562 | rask | ENSSSAP00000008722 | ENSSSAP00000038302 | Kit ligand-like. | GTPase KRas isoform X1. | 0.480 |
LOC106565101 | LOC106561562 | ENSSSAP00000120009 | ENSSSAP00000008722 | Uncharacterized protein LOC106565101. | Kit ligand-like. | 0.441 |
LOC106565101 | LOC106573710 | ENSSSAP00000120009 | ENSSSAP00000086179 | Uncharacterized protein LOC106565101. | Interleukin-34-like. | 0.812 |
LOC106565101 | csf1 | ENSSSAP00000120009 | ENSSSAP00000119084 | Uncharacterized protein LOC106565101. | Macrophage colony-stimulating factor 1. | 0.901 |
LOC106565101 | il34 | ENSSSAP00000120009 | ENSSSAP00000053012 | Uncharacterized protein LOC106565101. | Interleukin-34. | 0.812 |
LOC106565101 | kit | ENSSSAP00000120009 | ENSSSAP00000087611 | Uncharacterized protein LOC106565101. | Mast/stem cell growth factor receptor Kit isoform X2; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | 0.937 |
LOC106573710 | LOC106565101 | ENSSSAP00000086179 | ENSSSAP00000120009 | Interleukin-34-like. | Uncharacterized protein LOC106565101. | 0.812 |
LOC106573710 | csf1 | ENSSSAP00000086179 | ENSSSAP00000119084 | Interleukin-34-like. | Macrophage colony-stimulating factor 1. | 0.867 |
LOC106573710 | il34 | ENSSSAP00000086179 | ENSSSAP00000053012 | Interleukin-34-like. | Interleukin-34. | 0.901 |
page 1 of 3