STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aldh3a2Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (564 aa)    
Predicted Functional Partners:
LOC106584055
Alcohol dehydrogenase [NADP(+)] B.
   
 0.963
aldh6a1
Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial isoform X2.
   
 0.955
LOC106581942
Amine oxidase.
    
 0.955
LOC106586788
Amine oxidase.
    
 0.955
LOC106564456
4-aminobutyrate aminotransferase, mitochondrial-like; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.948
GABT-2
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase.
  
 0.948
agxt2
Alanine--glyoxylate aminotransferase 2, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.945
LOC106601268
Amine oxidase.
   
 0.937
LOC100194731
Amine oxidase.
   
 0.937
LOC106590278
Amine oxidase.
   
 0.937
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.