STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106589046Uncharacterized protein C6orf47-like. (306 aa)    
Predicted Functional Partners:
LOC106593877
G patch domain and ankyrin repeat-containing protein 1-like.
      
 0.598
LOC106563974
LOW QUALITY PROTEIN: G patch domain and ankyrin repeat-containing protein 1-like.
      
 0.598
abt1
Activator of basal transcription 1.
      
 0.511
bag6
Large proline-rich protein BAG6 isoform X2.
      
 0.467
LOC106605214
Large proline-rich protein BAG6-like isoform X2.
      
 0.467
LOC106588704
Large proline-rich protein BAG6-like.
      
 0.467
BAG6
Large proline-rich protein BAG6-like isoform X1.
      
 0.467
fam163a
Protein FAM163A.
      
 0.432
cssa14h1orf35
Multiple myeloma tumor-associated protein 2 homolog.
      
 0.432
LOC106599867
Multiple myeloma tumor-associated protein 2 homolog isoform X1.
      
 0.432
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.