STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106566976plexin-B1-like. (2252 aa)    
Predicted Functional Partners:
sema4d
semaphorin-4D isoform X1; Belongs to the semaphorin family.
    
0.784
LOC106613204
semaphorin-4E-like; Belongs to the semaphorin family.
    
0.758
LOC106613811
semaphorin-4E-like; Belongs to the semaphorin family.
    
 0.758
LOC106584397
semaphorin-4E-like; Belongs to the semaphorin family.
    
 0.758
LOC106569521
semaphorin-4E-like; Belongs to the semaphorin family.
    
 0.758
ENSSSAP00000080055
annotation not available
    
 0.695
LOC106578437
semaphorin-5A-like.
    
0.695
LOC106590027
Neuropilin; Belongs to the neuropilin family.
    
 0.671
LOC106578544
Neuropilin; Belongs to the neuropilin family.
    
 0.671
rnd3
Rho-related GTP-binding protein RhoE.
    
 0.656
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.