STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106589650PHD finger protein 10. (496 aa)    
Predicted Functional Partners:
LOC106576411
AT-rich interactive domain-containing protein 2-like isoform X1.
    
 
 0.955
LOC106609515
AT-rich interactive domain-containing protein 2-like isoform X1.
    
 
 0.955
LOC106562385
Bromodomain-containing protein 7-like.
    
 
 0.955
brd7
Bromodomain-containing protein 7.
    
 
 0.955
acl6b
Actin-like protein 6B isoform X1; Belongs to the actin family.
    
 
 0.953
LOC106574142
Actin-like protein 6B; Belongs to the actin family.
    
 
 0.953
LOC106585458
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.
   
 
 0.945
LOC106562830
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.
    
 
 0.944
LOC100380734
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.
    
 
 0.944
LOC106601341
Mucin-17-like isoform X1.
    
 
 0.940
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.