STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106571102Ryanodine receptor 3-like isoform X3. (4811 aa)    
Predicted Functional Partners:
fkb1a
FK506-binding protein 1A.
    
 0.762
LOC106567228
Peptidylprolyl isomerase.
    
 0.762
ENSSSAP00000069269
FKBP prolyl isomerase 1B.
    
 0.762
FKB1A
Peptidylprolyl isomerase.
    
 0.762
fkbp1b
FK506 binding protein 1b.
    
 0.762
FKBP3
Peptidylprolyl isomerase.
    
 0.713
fkbp3
Peptidylprolyl isomerase.
    
 0.713
LOC106566440
Peptidyl-prolyl cis-trans isomerase FKBP1A-like.
    
 0.690
LOC106579584
Aspartyl/asparaginyl beta-hydroxylase-like isoform X2.
   
 
 0.630
calm2
Calmodulin.
    
 
 0.567
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.