STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106586691Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (613 aa)    
Predicted Functional Partners:
cgl
Cystathionine gamma-lyase.
 
 0.998
LOC106573862
Uncharacterized protein LOC106573854.
 
 0.974
ahcy
Adenosylhomocysteinase.
  
 0.969
LOC106609228
Adenosylhomocysteinase.
  
 0.964
ahcyl2
Adenosylhomocysteinase.
  
 0.964
LOC106572868
Adenosylhomocysteinase.
  
 0.964
LOC106573363
Putative adenosylhomocysteinase 3 isoform X1.
  
 0.964
LOC106605075
L-threonine ammonia-lyase-like isoform X1.
  
 
 0.957
LOC106601062
L-serine dehydratase/L-threonine deaminase-like.
  
 
 0.957
LOC106576769
Serine racemase-like.
  
 
 0.957
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.