STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106569302Lipid phosphate phosphohydrolase 3-like. (314 aa)    
Predicted Functional Partners:
LOC106604578
Sphingosine-1-phosphate lyase 1-like isoform X1.
    
 0.923
LOC106576820
Sphingosine-1-phosphate lyase 1-like.
    
 0.923
asah2
Neutral ceramidase.
     
 0.913
LOC106599247
3-ketodihydrosphingosine reductase-like; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.911
LOC106569188
3-ketodihydrosphingosine reductase-like.
    
 0.911
LOC106602555
Acid ceramidase-like.
    
 0.907
LOC106568572
Ceramide glucosyltransferase-like.
    
 0.905
LOC106605793
Glucosylceramidase.
     
 0.901
gba2
Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide.
     
  0.900
LOC106562956
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
 0.836
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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