STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106572301Taste receptor type 1 member 1-like. (857 aa)    
Predicted Functional Partners:
LOC106583048
Taste receptor type 1 member 3-like.
  
  
0.780
pkd2l1
Polycystic kidney disease 2-like 1 protein.
      
 0.728
LOC106565959
Taste receptor type 1 member 3-like.
  
  
 
0.668
SKP1
S-phase kinase associated protein 1.
      
 0.640
SKP1-2
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
      
 0.640
wdr90
WD repeat-containing protein 90.
    
  0.634
fto
Alpha-ketoglutarate-dependent dioxygenase FTO isoform X1.
      
 0.609
ush2a
LOW QUALITY PROTEIN: usherin.
      
 0.594
trpm5
Transient receptor potential cation channel subfamily M member 5.
      
 0.545
LOC106609495
Platelet glycoprotein 4-like; Belongs to the CD36 family.
      
 0.544
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.