STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttll9Probable tubulin polyglutamylase TTLL9 isoform X1. (451 aa)    
Predicted Functional Partners:
LOC106573558
Centrosomal protein of 72 kDa-like.
   
    0.824
ankfn1
Ankyrin repeat and fibronectin type-III domain-containing protein 1 isoform X1.
   
    0.651
LOC106579195
Ankyrin repeat and fibronectin type-III domain-containing protein 1-like isoform X1.
   
    0.651
LOC106589864
Uncharacterized protein LOC106589864.
   
    0.651
ENSSSAP00000110145
annotation not available
  
   
 0.651
ENSSSAP00000023099
annotation not available
    
 
 0.611
ttll12
Tubulin--tyrosine ligase-like protein 12 isoform X1.
    
 
 0.611
dnali1
Axonemal dynein light intermediate polypeptide 1.
  
  
 0.603
rsph1
Radial spoke head 1 homolog.
      
 0.601
drc7
Dynein regulatory complex subunit 7 isoform X1.
      
 0.601
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.