STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106578846Canalicular multispecific organic anion transporter 2-like isoform X1. (1537 aa)    
Predicted Functional Partners:
katnal2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.613
ENSSSAP00000029990
Golgi-associated PDZ and coiled-coil motif-containing protein-like.
   
 0.536
LOC106571388
Golgi-associated PDZ and coiled-coil motif-containing protein-like isoform X1.
   
 0.536
abcb7
ATP-binding cassette sub-family B member 7, mitochondrial.
    
0.525
ENSSSAP00000111429
Ubiquitin specific peptidase 10.
    
  0.521
LOC106587349
Ubiquitin carboxyl-terminal hydrolase.
    
  0.521
LOC106574323
ATP-binding cassette sub-family B member 6, mitochondrial-like.
    
0.499
LOC106575100
ATP-binding cassette sub-family B member 6, mitochondrial-like.
    
0.499
LOC106586233
Rap guanine nucleotide exchange factor 4-like isoform X1.
    
 0.498
LOC106581759
Rap guanine nucleotide exchange factor 4-like isoform X2.
    
 0.498
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.