STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106583939Nuclear protein 1-like isoform X1. (75 aa)    
Predicted Functional Partners:
chac1
Gamma-glutamylcyclotransferase; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.
   
  
 0.579
LOC106612126
Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily.
      
 0.555
SVIP
Small VCP/p97-interacting protein.
      
 0.537
LOC106611151
interleukin-17F-like.
      
 0.497
LOC106560581
Prothymosin alpha-A-like isoform X1.
    
 
 0.457
LOC106583964
Prothymosin alpha-A-like isoform X2.
    
 
 0.457
ENSSSAP00000047017
SH3 domain-containing RING finger protein 3-like.
      
 0.452
LOC106586408
SH3 domain-containing RING finger protein 3-like.
      
 0.452
LOC106586407
SH3 domain-containing RING finger protein 3-like.
      
 0.452
LOC106612220
SH3 domain-containing RING finger protein 3-like isoform X1.
      
 0.452
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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