STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106569202Myosin-7-like; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1943 aa)    
Predicted Functional Partners:
LOC100194642
Myosin, light polypeptide 3-1.
   
 0.764
LOC100194662
Myosin light chain 1-1.
   
 0.764
LOC106565518
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome.
   
 0.764
myl6b
Salmo salar Myosin light polypeptide 6B (myl6b), mRNA.
   
 0.663
LOC106583240
Myosin light polypeptide 6.
   
 0.663
LOC106567035
Myosin light polypeptide 6-like isoform X2.
   
 0.663
LOC106565219
Myosin regulatory light chain 2, smooth muscle isoform.
   
 0.636
LOC106583599
Myosin regulatory light polypeptide 9.
   
 0.636
LOC106578694
Myosin regulatory light chain 2, smooth muscle isoform.
   
 0.636
LOC106590146
Myosin regulatory light chain 2, smooth muscle isoform.
   
 0.636
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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