STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106603847Gamma-aminobutyric acid receptor subunit alpha-6-like; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (468 aa)    
Predicted Functional Partners:
alkbh8
Alkylated DNA repair protein alkB homolog 8 isoform X1.
      
 0.809
kbtbd3
Kelch repeat and BTB domain-containing protein 3 isoform X1.
      
 0.796
gbrd
Gamma-aminobutyric acid receptor subunit delta; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
0.759
LOC106566882
Gamma-aminobutyric acid receptor subunit delta-like isoform X1; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
0.759
srm
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
      
 0.742
LOC106582628
RNA-binding protein Raly-like.
   
  
 0.724
LOC106565059
RNA-binding protein Raly-like isoform X2.
   
  
 0.724
LOC106610931
Gamma-aminobutyric acid receptor subunit gamma-1-like isoform X1; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.718
LOC106600519
Gamma-aminobutyric acid receptor subunit gamma-1-like; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.716
LOC106567504
Gamma-aminobutyric acid receptor subunit gamma-2.
  
0.715
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.