Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APBA1 | ENSSSAP00000067121 | ENSSSAP00000048408 | ENSSSAP00000067121 | Amyloid beta A4 precursor protein-binding family A member 1-like. | Lin-7 homolog A (C. elegans). | 0.629 |
APBA1 | ENSSSAP00000105696 | ENSSSAP00000048408 | ENSSSAP00000105696 | Amyloid beta A4 precursor protein-binding family A member 1-like. | Calcium/calmodulin-dependent serine protein kinase b. | 0.972 |
APBA1 | LOC106563518 | ENSSSAP00000048408 | ENSSSAP00000022332 | Amyloid beta A4 precursor protein-binding family A member 1-like. | Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family. | 0.629 |
APBA1 | LOC106587489 | ENSSSAP00000048408 | ENSSSAP00000049963 | Amyloid beta A4 precursor protein-binding family A member 1-like. | Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family. | 0.629 |
APBA1 | LOC106609408 | ENSSSAP00000048408 | ENSSSAP00000012206 | Amyloid beta A4 precursor protein-binding family A member 1-like. | Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family. | 0.629 |
APBA1 | lin7b | ENSSSAP00000048408 | ENSSSAP00000000839 | Amyloid beta A4 precursor protein-binding family A member 1-like. | Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family. | 0.629 |
APBA1 | urm1 | ENSSSAP00000048408 | ENSSSAP00000032628 | Amyloid beta A4 precursor protein-binding family A member 1-like. | Ubiquitin-related modifier 1; Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by MOCS3. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins. The thiocarboxylated form serves as substrate for conjugation and oxidative stress specifically [...] | 0.609 |
ENSSSAP00000048389 | ENSSSAP00000067121 | ENSSSAP00000048389 | ENSSSAP00000067121 | annotation not available | Lin-7 homolog A (C. elegans). | 0.629 |
ENSSSAP00000048389 | ENSSSAP00000105696 | ENSSSAP00000048389 | ENSSSAP00000105696 | annotation not available | Calcium/calmodulin-dependent serine protein kinase b. | 0.972 |
ENSSSAP00000048389 | LOC106563518 | ENSSSAP00000048389 | ENSSSAP00000022332 | annotation not available | Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family. | 0.629 |
ENSSSAP00000048389 | LOC106587489 | ENSSSAP00000048389 | ENSSSAP00000049963 | annotation not available | Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family. | 0.629 |
ENSSSAP00000048389 | LOC106609408 | ENSSSAP00000048389 | ENSSSAP00000012206 | annotation not available | Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family. | 0.629 |
ENSSSAP00000048389 | lin7b | ENSSSAP00000048389 | ENSSSAP00000000839 | annotation not available | Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family. | 0.629 |
ENSSSAP00000048389 | urm1 | ENSSSAP00000048389 | ENSSSAP00000032628 | annotation not available | Ubiquitin-related modifier 1; Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by MOCS3. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins. The thiocarboxylated form serves as substrate for conjugation and oxidative stress specifically [...] | 0.609 |
ENSSSAP00000067121 | APBA1 | ENSSSAP00000067121 | ENSSSAP00000048408 | Lin-7 homolog A (C. elegans). | Amyloid beta A4 precursor protein-binding family A member 1-like. | 0.629 |
ENSSSAP00000067121 | ENSSSAP00000048389 | ENSSSAP00000067121 | ENSSSAP00000048389 | Lin-7 homolog A (C. elegans). | annotation not available | 0.629 |
ENSSSAP00000067121 | ENSSSAP00000105696 | ENSSSAP00000067121 | ENSSSAP00000105696 | Lin-7 homolog A (C. elegans). | Calcium/calmodulin-dependent serine protein kinase b. | 0.982 |
ENSSSAP00000067121 | LOC106566682 | ENSSSAP00000067121 | ENSSSAP00000072077 | Lin-7 homolog A (C. elegans). | Amyloid beta A4 precursor protein-binding family A member 1-like isoform X2. | 0.629 |
ENSSSAP00000067121 | apba1 | ENSSSAP00000067121 | ENSSSAP00000045517 | Lin-7 homolog A (C. elegans). | Amyloid beta A4 precursor protein-binding family A member 1 isoform X1. | 0.629 |
ENSSSAP00000105696 | APBA1 | ENSSSAP00000105696 | ENSSSAP00000048408 | Calcium/calmodulin-dependent serine protein kinase b. | Amyloid beta A4 precursor protein-binding family A member 1-like. | 0.972 |
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