STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106564657Mitochondrial Rho GTPase 1-A-like. (692 aa)    
Predicted Functional Partners:
LOC106611341
Intersectin-2-like.
    
 0.882
ENSSSAP00000067020
Intersectin 2b.
    
 0.882
LOC100286499
Intersectin-1 isoform X5.
    
 0.805
LOC106574310
Intersectin-1-like isoform X8.
    
 0.805
LOC106583318
Cell surface glycoprotein 1-like isoform X1.
    
 0.805
tomm70a
Mitochondrial import receptor subunit TOM70.
    
 0.789
myo19
Unconventional myosin-XIX isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.788
wdr90
WD repeat-containing protein 90.
   
 0.782
usp30
Ubiquitin carboxyl-terminal hydrolase.
     
 0.778
ENSSSAP00000024395
annotation not available
   
 0.763
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.