STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cd4Truncated CD4-2A-like protein isoform X1. (340 aa)    
Predicted Functional Partners:
IL-10
Interleukin-10-like.
     
 0.560
LOC100136512
Interleukin-10.
     
 0.560
LOC100136450
CD8 alpha precursor.
     
 0.538
LOC106571057
interleukin-17F-like.
    
 
 0.533
LOC106611214
interleukin-17A-like.
    
 
 0.528
gata3
Transcription factor GATA-3 isoform X1.
      
 0.493
cd3e
CD3epsilon isoform 1 precursor.
   
 
 0.459
LOC106600843
interleukin-17F-like.
    
 
 0.453
LOC106601367
Interleukin-17A/F2 isoform a.
    
 
 0.451
LOC100136451
CD8 beta precursor.
      
 0.416
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.