STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106578866Forkhead box protein K2-like. (614 aa)    
Predicted Functional Partners:
LOC106565169
Ubiquitin carboxyl-terminal hydrolase.
    
 0.834
LOC106583439
Ubiquitin carboxyl-terminal hydrolase.
    
 0.834
LOC106611331
Putative Polycomb group protein ASXL2 isoform X3.
    
 0.779
LOC106603742
Putative Polycomb group protein ASXL2 isoform X2.
    
 0.779
LOC106581314
phenylalanine--tRNA ligase beta subunit-like isoform X1.
   
  
 0.773
OGT
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X4.
    
 0.761
LOC106604253
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit-like isoform X8.
    
 0.761
LOC106584153
Ubiquitin carboxyl-terminal hydrolase.
    
 0.724
uchl5
Ubiquitin carboxyl-terminal hydrolase.
    
 0.724
LOC106566823
Putative Polycomb group protein ASXL1 isoform X1.
   
 0.699
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.