STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106575184Integral membrane protein 2B-like. (256 aa)    
Predicted Functional Partners:
prs10
26S protease regulatory subunit S10B; Belongs to the AAA ATPase family.
   
  
 0.697
NDUB6
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6-like.
      
 0.694
LOC106577931
Gamma-secretase subunit PEN-2.
   
  
 0.676
LOC106605614
Gamma-secretase subunit PEN-2-like.
   
  
 0.676
LOC106572261
Transforming protein RhoA.
   
 
 0.564
LOC106565140
Transforming protein RhoA-like.
   
 
 0.564
tgfbi
Transforming growth factor-beta-induced protein ig-h3 isoform X1.
   
 
 0.530
clybl
Zinc finger protein ZIC 2-like.
      
 0.523
LOC106581638
Zinc finger protein ZIC 2-like.
      
 0.523
LOC106573597
Cold-inducible RNA-binding protein B-like isoform X5.
   
 
 0.492
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.