STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
panx2Pannexin; Structural component of the gap junctions and the hemichannels; Belongs to the pannexin family. (656 aa)    
Predicted Functional Partners:
LOC106579937
Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2.
      
 0.771
panx1
Pannexin; Structural component of the gap junctions and the hemichannels; Belongs to the pannexin family.
     
0.718
LOC106612897
Pannexin; Structural component of the gap junctions and the hemichannels; Belongs to the pannexin family.
     
0.718
ENSSSAP00000098862
annotation not available
     
 0.718
ENSSSAP00000112530
annotation not available
     
0.718
LOC106566425
Zinc finger protein PLAGL2-like isoform X1.
      
 0.693
plagl2
Zinc finger protein PLAGL2.
      
 0.693
LOC106603528
Receptor-interacting serine/threonine-protein kinase 4-like.
      
 0.675
RIPK4
Receptor-interacting serine/threonine-protein kinase 4-like.
      
 0.675
Ptchd1
Patched domain containing 1.
      
 0.660
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.