STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106583970Prostaglandin G/H synthase 2-like isoform X1. (637 aa)    
Predicted Functional Partners:
LOC106583179
Prostacyclin synthase-like; Belongs to the cytochrome P450 family.
   
 0.922
LOC106583533
Prostacyclin synthase-like; Belongs to the cytochrome P450 family.
   
 0.922
LOC106565340
Prostacyclin synthase-like; Belongs to the cytochrome P450 family.
   
 0.922
prxl2b
Prostamide/prostaglandin F synthase; Catalyzes the reduction of prostaglandin-ethanolamide H(2) (prostamide H(2)) to prostamide F(2alpha) with NADPH as proton donor. Also able to reduce prostaglandin H(2) to prostaglandin F(2alpha) (By similarity); Belongs to the peroxiredoxin-like PRXL2 family. Prostamide/prostaglandin F synthase subfamily.
     
 0.919
hpgds
Hematopoietic prostaglandin D synthase isoform X1.
     
 0.919
ALOX5
Arachidonate 5-lipoxygenase-like.
   
 
 0.918
LOC106561393
thromboxane-A synthase-like; Belongs to the cytochrome P450 family.
   
 
 0.913
thas
Thromboxane-A synthase; Belongs to the cytochrome P450 family.
   
 
 0.913
LOC106577419
Docosahexaenoic acid omega-hydroxylase CYP4F3-like isoform X2; Belongs to the cytochrome P450 family.
   
 
 0.908
LOC106590529
Lipocalin-like; Belongs to the calycin superfamily. Lipocalin family.
     
 0.904
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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