STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cops3-2COP9 constitutive photomorphogenic homolog subunit 3. (426 aa)    
Predicted Functional Partners:
LOC106562268
COP9 signalosome complex subunit 4 isoform X1.
   
 0.998
csn4
Salmo salar COP9 signalosome complex subunit 4 (csn4), mRNA.
   
 0.995
LOC106584722
COP9 signalosome complex subunit 2-like isoform X1.
   
 0.993
cops2
COP9 signalosome complex subunit 2 isoform X4.
   
 0.993
LOC106579522
COP9 constitutive photomorphogenic homolog subunit 5.
   
 0.991
cops5
COP9 signalosome complex subunit 5.
   
 0.991
csn6
COP9 signalosome complex subunit 6.
   
 0.989
COPS6
COP9 signalosome complex subunit 6.
   
 0.989
csn8
COP9 signalosome complex subunit 8.
   
 0.988
LOC106581673
COP9 signalosome complex subunit 8 isoform X1.
   
 0.988
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.