STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ankrd22Ankyrin repeat domain-containing protein 22 isoform X1. (181 aa)    
Predicted Functional Partners:
LOC106570361
Zinc finger protein 40-like isoform X1.
    
 0.618
LOC106589029
Zinc finger protein 40-like isoform X1.
    
 0.618
ENSSSAP00000083361
annotation not available
    
 0.618
ift52
Intraflagellar transport protein 52 homolog.
    
 0.561
rwdd2b
RWD domain-containing protein 2B.
    
 
 0.559
armc3
Armadillo repeat-containing protein 3.
    
 
 0.559
pllp
Plasmolipin.
      
 0.553
ift57
Intraflagellar transport protein 57 homolog isoform X1.
    
 0.548
ift80
LOW QUALITY PROTEIN: intraflagellar transport protein 80 homolog.
    
 0.547
ENSSSAP00000024051
annotation not available
   
 0.544
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.