STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106608776E3 ubiquitin-protein ligase KEG-like. (167 aa)    
Predicted Functional Partners:
LOC106606575
Baculoviral IAP repeat-containing protein 6-like isoform X14.
   
 0.973
ENSSSAP00000012232
annotation not available
    
 0.968
LOC100194654
Salmo salar ribosomal protein S27-3 (LOC100194654), mRNA.
    
 0.968
CG024
CG024 protein precursor.
    
 0.968
LOC106577118
ubiquitin-40S ribosomal protein S27a.
    
 0.968
ENSSSAP00000038951
Inhibitor of nuclear factor kappa B kinase subunit beta.
   
 0.938
ikbkb
Inhibitor of nuclear factor kappa-B kinase subunit beta.
   
 0.938
LOC106579286
Inhibitor of nuclear factor kappa-B kinase subunit alpha-like.
   
 0.938
LOC106579422
Inhibitor of nuclear factor kappa-B kinase subunit alpha-like.
   
 0.938
CHUK
Inhibitor of nuclear factor kappa-B kinase subunit alpha-like.
   
 0.938
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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