STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106586509A-kinase anchor protein 17A-like. (712 aa)    
Predicted Functional Partners:
asmtl
N-acetylserotonin O-methyltransferase-like protein isoform X1.
      
 0.837
itgbl1
Integrin beta-like protein 1.
      
 0.683
LOC106611414
Acetylserotonin O-methyltransferase-like.
      
 0.653
LOC106575201
Glycogenin-1-like.
      
 0.650
CDCA4
Cell division cycle-associated protein 4-like.
      
 0.642
LOC106571684
Cell division cycle-associated protein 4-like isoform X2.
      
 0.642
ENSSSAP00000066084
Dehydrogenase/reductase (SDR family) X-linked.
      
 0.642
LOC106574274
Dehydrogenase/reductase SDR family member on chromosome X-like isoform X1.
      
 0.642
LOC106581644
Regulator of nonsense transcripts 3A-like isoform X3.
      
 0.639
LOC106586023
Regulator of nonsense transcripts 3A-like isoform X4.
      
 0.639
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.